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Simplot Science recombination detection program rdp analysis
<t>Recombination</t> trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " width="250" height="auto" />
Recombination Detection Program Rdp Analysis, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/recombination+detection+program/detection+program+recombination/pmc12665679-113-0-37
Average 86 stars, based on 1 article reviews
recombination detection program rdp analysis - by Bioz Stars, 2026-10
86/100 stars

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1) Product Images from "Isolation and characterization of an enterovirus G strain causing diarrhea and gut microbiota dysbiosis in piglets"

Article Title: Isolation and characterization of an enterovirus G strain causing diarrhea and gut microbiota dysbiosis in piglets

Journal: Frontiers in Cellular and Infection Microbiology

doi: 10.3389/fcimb.2025.1699507

Recombination trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " title="Recombination trend analysis of EV-G Epidemic Strains. Recombination events ..." property="contentUrl" width="100%" height="100%"/>
Figure Legend Snippet: Recombination trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis.

Techniques Used: Software

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Article Snippet: Potential Recombination event analysis was conducted using SimPlot software (version 3.5.1) and Recombination Detection Program (RDP4, version 4.100).

Recombinant:

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Article Title: Recombination and natural selection in hepatitis E virus genotypes.
Article Snippet: Xiaoming Chen, Qian Zhang, Chao He, Lei Zhang, Jinghua Li, Weilu Zhang, Wei Cao, Yong-Gang Lv, Zhengcai Liu, Jing-Xia Zhang,* and Zhong-Jun Shao* Department of Epidemiology, School of Public Health, Fourth Military Medical University, Xi’an, China Department of Chinese Traditional Medicine, Xijing Hospital, Fourth Military Medical University, Xi’an, China Department of Interventional Section Tangdu Hospital, Fourth Military Medical University China, Xi’an, China Department of Vascular and Endocrine Surgery, First Affiliated Hospital, The Fourth Military Medical University, Xi’an, China Department of Hepatobiliary Surgery, Xijing Hospital, Fourth Military Medical University, Xi’an, China

Selection:

Article Title: Recombination and natural selection in hepatitis E virus genotypes.
Article Snippet: Xiaoming Chen, Qian Zhang, Chao He, Lei Zhang, Jinghua Li, Weilu Zhang, Wei Cao, Yong-Gang Lv, Zhengcai Liu, Jing-Xia Zhang,* and Zhong-Jun Shao* Department of Epidemiology, School of Public Health, Fourth Military Medical University, Xi’an, China Department of Chinese Traditional Medicine, Xijing Hospital, Fourth Military Medical University, Xi’an, China Department of Interventional Section Tangdu Hospital, Fourth Military Medical University China, Xi’an, China Department of Vascular and Endocrine Surgery, First Affiliated Hospital, The Fourth Military Medical University, Xi’an, China Department of Hepatobiliary Surgery, Xijing Hospital, Fourth Military Medical University, Xi’an, China



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<t>Recombination</t> trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " width="250" height="auto" />
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Image Search Results


Recombination trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " width="100%" height="100%">

Journal: Frontiers in Cellular and Infection Microbiology

Article Title: Isolation and characterization of an enterovirus G strain causing diarrhea and gut microbiota dysbiosis in piglets

doi: 10.3389/fcimb.2025.1699507

Figure Lengend Snippet: Recombination trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis.

Article Snippet: Recombination detection program (RDP) analysis of the full-length EVG-SH-2024 genome, together with other EV-G sequences, indicated close relatedness to strain 13-03212/United States/2014 ( KF985175 ) in the genomic region spanning nt 1, 318–3, 830, as determined by SimPlot/SIScan analysis (P ≤ 7.468 × 10 -30 ) ( ).

Techniques: Software

Genetic  recombination  events of GNU-2353 and GNU-2377 detected by RDP4 software.

Journal: Transboundary and Emerging Diseases

Article Title: Comparative Genomic and Biological Investigation of NADC30- and NADC34-Like PRRSV Strains Isolated in South Korea

doi: 10.1155/tbed/9015349

Figure Lengend Snippet: Genetic recombination events of GNU-2353 and GNU-2377 detected by RDP4 software.

Article Snippet: Potential recombination events were analyzed using recombination detection program (RDP), SimPlot, and phylogeny, as described previously [ ].

Techniques: Software